Gene detail information of Glyur001296s00027382.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G38210.12.00E-79Protein kinase family protein
NRKHN20769.10Putative serine/threonine-protein kinase [Glycine soja]
COGYP_001542803.19.00E-38serine/threonine protein kinase [Herpetosiphon aurantiacus DSM 785]
Swissprottr|P0C5E2|Y1839_ARATH1.00E-92Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|V7C5U5|V7C5U5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW24723.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012962145831048+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001296s00027382.2PF07714.12Pkinase_Tyr1403565.10E-34
Glyur001296s00027382.2PF07714.12Pkinase_Tyr4377048.90E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.311
SRR1783600control3.405
SRR1783602moderate drought stress1.658
SRR1811619moderate drought stress1.660

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.773
DRR006520Root Summer glycyrrhizin high producing strain13.738
DRR006521Root Winter glycyrrhizin high producing strain6.293
DRR006522Root Winter glycyrrhizin high producing strain6.016
DRR006523Root Summer glycyrrhizin low producing strain19.891
DRR006524Root Summer glycyrrhizin low producing strain20.473
DRR006525Leaf Summer glycyrrhizin high producing strain2.294
DRR006526Leaf Summer glycyrrhizin high producing strain2.277

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.835
SRR2868004Drought Stress(Tissue:root)3.352
SRR2967015Control (Tissue:root)2.793

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.715
SRR9715740Leave3.248
SRR9715741Leave5.868
SRR9715739Root4.304
SRR9715742Root7.983
SRR9715743Root7.551

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.224
SRR8749028MeJA induced 9h22.555
SRR8749029MeJA induced 9h27.360
SRR8749030Uninduced24.928
SRR8749031Uninduced41.082
SRR8749032Uninduced28.876

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.268
SRR8400027Control-Root12.056

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved