Gene detail information of Glyur001300s00030276.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68810.1 | 2.00E-25 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003518258.1 | 1.79E-107 | PREDICTED: transcription factor bHLH30-like [Glycine max] |
| Swissprot | tr|Q9S7Y1|BH030_ARATH | 8.00E-31 | Transcription factor bHLH30 |
| trEMBL | tr|I1JGZ8|I1JGZ8_SOYBN | 7.00E-108 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G37720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01300 | 32967 | 34474 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001300s00030276.1 | PF00010.21 | HLH | 50 | 97 | 1.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.973 |
| SRR1783600 | control | 7.905 |
| SRR1783602 | moderate drought stress | 27.768 |
| SRR1811619 | moderate drought stress | 27.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.517 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.983 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 70.987 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 69.865 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.723 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.195 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.107 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.198 |
| SRR2967015 | Control (Tissue:root) | 4.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.328 |
| SRR9715740 | Leave | 0.736 |
| SRR9715741 | Leave | 0.838 |
| SRR9715739 | Root | 3.190 |
| SRR9715742 | Root | 18.731 |
| SRR9715743 | Root | 12.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.289 |
| SRR8749028 | MeJA induced 9h | 0.047 |
| SRR8749029 | MeJA induced 9h | 0.158 |
| SRR8749030 | Uninduced | 0.200 |
| SRR8749031 | Uninduced | 0.107 |
| SRR8749032 | Uninduced | 0.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.523 |
| SRR8400027 | Control-Root | 3.688 |