Gene detail information of Glyur001300s00030282.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33580.17.00E-77beta carbonic anhydrase 5
NRXP_004490442.19.86E-175PREDICTED: carbonic anhydrase, chloroplastic-like [Cicer arietinum]
COGYP_006372723.11.00E-36carbonate dehydratase [Tistrella mobilis KA081020-065]
Swissprottr|Q94CE3|BCA5_ARATH4.00E-94Beta carbonic anhydrase 5, chloroplastic (Precursor)
trEMBLtr|G7KBK0|G7KBK0_MEDTR4.00E-174Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013005640760078+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01673cynT, can EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0015976  carbon utilization


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001300s00030282.1PF00484.14Pro_CA1262803.10E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.171
SRR1783600control0.212
SRR1783602moderate drought stress1.209
SRR1811619moderate drought stress1.375

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.631
DRR006520Root Summer glycyrrhizin high producing strain1.549
DRR006521Root Winter glycyrrhizin high producing strain5.639
DRR006522Root Winter glycyrrhizin high producing strain6.214
DRR006523Root Summer glycyrrhizin low producing strain0.303
DRR006524Root Summer glycyrrhizin low producing strain0.189
DRR006525Leaf Summer glycyrrhizin high producing strain7.259
DRR006526Leaf Summer glycyrrhizin high producing strain7.247

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.787
SRR2868004Drought Stress(Tissue:root)34.038
SRR2967015Control (Tissue:root)50.061

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.238
SRR9715740Leave30.847
SRR9715741Leave28.367
SRR9715739Root0.090
SRR9715742Root1.041
SRR9715743Root1.128

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.180
SRR8749028MeJA induced 9h3.618
SRR8749029MeJA induced 9h0.257
SRR8749030Uninduced0.155
SRR8749031Uninduced0.190
SRR8749032Uninduced0.036

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.356
SRR8400027Control-Root7.423

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved