Gene detail information of Glyur001303s00026783.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78580.16.00E-106trehalose-6-phosphate synthase
NRXP_003541811.12.81E-172PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1 [Glycine max]
COGYP_006545085.14.00E-24alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q9SYM4|TPS1_ARATH6.00E-125Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
trEMBLtr|I1M2V9|I1M2V9_SOYBN1.00E-172Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G33970.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013031712955+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001303s00026783.1PF02358.11Trehalose_PPase31653.50E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.312
SRR1783600control8.504
SRR1783602moderate drought stress8.950
SRR1811619moderate drought stress8.753

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.801
DRR006520Root Summer glycyrrhizin high producing strain26.472
DRR006521Root Winter glycyrrhizin high producing strain4.512
DRR006522Root Winter glycyrrhizin high producing strain4.287
DRR006523Root Summer glycyrrhizin low producing strain15.169
DRR006524Root Summer glycyrrhizin low producing strain15.172
DRR006525Leaf Summer glycyrrhizin high producing strain24.628
DRR006526Leaf Summer glycyrrhizin high producing strain23.997

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.983
SRR2868004Drought Stress(Tissue:root)15.613
SRR2967015Control (Tissue:root)15.119

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.438
SRR9715740Leave22.606
SRR9715741Leave12.774
SRR9715739Root2.968
SRR9715742Root21.308
SRR9715743Root17.788

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.919
SRR8749028MeJA induced 9h0.072
SRR8749029MeJA induced 9h0.525
SRR8749030Uninduced0.067
SRR8749031Uninduced0.041
SRR8749032Uninduced0.058

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.535
SRR8400027Control-Root21.116

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved