Gene detail information of Glyur001309s00032169.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26540.10Leucine-rich repeat receptor-like protein kinase family protein
NRKEH31809.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004775215.11.00E-66RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGR3|Y4265_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g26540 (Precursor)
trEMBLtr|A0A072UPQ0|A0A072UPQ0_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH31809.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013091316218103-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001309s00032169.1PF08263.7LRRNT_227677.30E-10
Glyur001309s00032169.1PF12799.2LRR_41191546.00E-07
Glyur001309s00032169.1PF12799.2LRR_43353722.30E-06
Glyur001309s00032169.1PF00560.28LRR_13844061.3
Glyur001309s00032169.1PF13855.1LRR_85766361.80E-07
Glyur001309s00032169.1PF00069.20Pkinase77710194.00E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.581
SRR1783600control6.631
SRR1783602moderate drought stress10.837
SRR1811619moderate drought stress10.716

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.828
DRR006520Root Summer glycyrrhizin high producing strain1.793
DRR006521Root Winter glycyrrhizin high producing strain0.829
DRR006522Root Winter glycyrrhizin high producing strain0.863
DRR006523Root Summer glycyrrhizin low producing strain0.867
DRR006524Root Summer glycyrrhizin low producing strain0.851
DRR006525Leaf Summer glycyrrhizin high producing strain6.886
DRR006526Leaf Summer glycyrrhizin high producing strain6.877

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.937
SRR2868004Drought Stress(Tissue:root)17.193
SRR2967015Control (Tissue:root)15.090

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.454
SRR9715740Leave2.245
SRR9715741Leave1.609
SRR9715739Root2.078
SRR9715742Root2.862
SRR9715743Root2.501

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.323
SRR8749028MeJA induced 9h1.427
SRR8749029MeJA induced 9h0.785
SRR8749030Uninduced0.767
SRR8749031Uninduced0.348
SRR8749032Uninduced0.678

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.117
SRR8400027Control-Root11.026

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved