Gene detail information of Glyur001310s00030805.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80840.1 | 1.00E-29 | WRKY DNA-binding protein 40 |
| NR | ACU18913.1 | 2.76E-133 | unknown [Glycine max] |
| Swissprot | tr|Q9SAH7|WRK40_ARATH | 4.00E-56 | Probable WRKY transcription factor 40 |
| trEMBL | tr|C6TAR1|C6TAR1_SOYBN | 1.00E-133 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU18913.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01310 | 12429 | 15254 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.042 |
| SRR1783600 | control | 11.096 |
| SRR1783602 | moderate drought stress | 37.660 |
| SRR1811619 | moderate drought stress | 37.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 117.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 116.766 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.245 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 118.399 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 118.303 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 56.713 |
| SRR2868004 | Drought Stress(Tissue:root) | 127.531 |
| SRR2967015 | Control (Tissue:root) | 180.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 674.730 |
| SRR9715740 | Leave | 383.644 |
| SRR9715741 | Leave | 1069.514 |
| SRR9715739 | Root | 24.789 |
| SRR9715742 | Root | 261.345 |
| SRR9715743 | Root | 209.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 526.616 |
| SRR8749028 | MeJA induced 9h | 572.877 |
| SRR8749029 | MeJA induced 9h | 438.471 |
| SRR8749030 | Uninduced | 305.181 |
| SRR8749031 | Uninduced | 190.578 |
| SRR8749032 | Uninduced | 355.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 44.946 |
| SRR8400027 | Control-Root | 83.864 |