Gene detail information of Glyur001310s00030809.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G80860.23.00E-69phospholipid N-methyltransferase
NRACJ86117.13.99E-99unknown [Medicago truncatula]
Swissprottr|Q9SAH5|PLMT_ARATH2.00E-87Phosphatidyl-N-methylethanolamine N-methyltransferase
trEMBLtr|B7FMY4|B7FMY4_MEDTR1.00E-99Uncharacterized protein {ECO:0000313|EMBL:AFK47357.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013102976531974-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00550OPI3 EC:2.1.1.16 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0006644  phospholipid metabolic process


molecular_function

GO:0008170  N-methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001310s00030809.1PF04191.8PEMT711513.80E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control67.742
SRR1783600control66.146
SRR1783602moderate drought stress44.688
SRR1811619moderate drought stress44.504

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.815
DRR006520Root Summer glycyrrhizin high producing strain31.886
DRR006521Root Winter glycyrrhizin high producing strain4.139
DRR006522Root Winter glycyrrhizin high producing strain3.894
DRR006523Root Summer glycyrrhizin low producing strain26.391
DRR006524Root Summer glycyrrhizin low producing strain26.534
DRR006525Leaf Summer glycyrrhizin high producing strain23.198
DRR006526Leaf Summer glycyrrhizin high producing strain23.084

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)50.684
SRR2868004Drought Stress(Tissue:root)36.133
SRR2967015Control (Tissue:root)40.842

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.231
SRR9715740Leave21.658
SRR9715741Leave19.861
SRR9715739Root26.802
SRR9715742Root22.604
SRR9715743Root21.637

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.391
SRR8749028MeJA induced 9h16.888
SRR8749029MeJA induced 9h28.059
SRR8749030Uninduced5.472
SRR8749031Uninduced5.061
SRR8749032Uninduced8.093

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.751
SRR8400027Control-Root38.627

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved