Gene detail information of Glyur001314s00034329.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40150.1 | 9.00E-101 | Peroxidase superfamily protein |
| NR | XP_003628628.1 | 7.88E-172 | Peroxidase [Medicago truncatula] |
| Swissprot | tr|Q9FJR1|PER65_ARATH | 3.00E-123 | Peroxidase 65 (Precursor) |
| trEMBL | tr|G7LEQ9|G7LEQ9_MEDTR | 3.00E-172 | Peroxidase family protein {ECO:0000313|EMBL:AET03104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01314 | 48841 | 56701 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001314s00034329.3 | PF00141.18 | peroxidase | 26 | 62 | 1.60E-05 |
| Glyur001314s00034329.3 | PF03141.11 | Methyltransf_29 | 67 | 153 | 1.70E-35 |
| Glyur001314s00034329.3 | PF00141.18 | peroxidase | 201 | 449 | 2.80E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.084 |
| SRR1783600 | control | 1.913 |
| SRR1783602 | moderate drought stress | 1.414 |
| SRR1811619 | moderate drought stress | 1.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.072 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.070 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.549 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.163 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.383 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.135 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.143 |
| SRR2967015 | Control (Tissue:root) | 0.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.563 |
| SRR9715740 | Leave | 1.667 |
| SRR9715741 | Leave | 2.218 |
| SRR9715739 | Root | 0.539 |
| SRR9715742 | Root | 0.369 |
| SRR9715743 | Root | 0.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.394 |
| SRR8400027 | Control-Root | 1.775 |