Gene detail information of Glyur001316s00033462.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18335.1 | 5.00E-55 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | KHN43664.1 | 1.07E-152 | N-alpha-acetyltransferase 40 [Glycine soja] |
| trEMBL | tr|K7LEF2|K7LEF2_SOYBN | 2.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G30080.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01316 | 10785 | 15747 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001316s00033462.1 | PF00583.19 | Acetyltransf_1 | 141 | 216 | 2.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.901 |
| SRR1783600 | control | 12.015 |
| SRR1783602 | moderate drought stress | 16.835 |
| SRR1811619 | moderate drought stress | 16.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.723 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.463 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.772 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.601 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.904 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.927 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.225 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.380 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.764 |
| SRR2967015 | Control (Tissue:root) | 12.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 9.414 |
| SRR9715740 | Leave | 11.594 |
| SRR9715741 | Leave | 9.287 |
| SRR9715739 | Root | 5.004 |
| SRR9715742 | Root | 8.421 |
| SRR9715743 | Root | 7.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.583 |
| SRR8749028 | MeJA induced 9h | 10.164 |
| SRR8749029 | MeJA induced 9h | 12.427 |
| SRR8749030 | Uninduced | 8.583 |
| SRR8749031 | Uninduced | 5.596 |
| SRR8749032 | Uninduced | 9.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.954 |
| SRR8400027 | Control-Root | 13.545 |