Gene detail information of Glyur001316s00033464.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14440.2 | 5.00E-32 | homeobox protein 31 |
| NR | KEH26786.1 | 5.95E-76 | zinc finger homeodomain protein [Medicago truncatula] |
| Swissprot | tr|Q10DV5|ZHD11_ORYSJ | 3.00E-41 | Zinc-finger homeodomain protein 11 |
| trEMBL | tr|A0A072UBE0|A0A072UBE0_MEDTR | 2.00E-76 | Zinc finger homeodomain protein {ECO:0000313|EMBL:KEH26786.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01316 | 30522 | 31091 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | zf-HD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001316s00033464.1 | PF04770.7 | ZF-HD_dimer | 9 | 59 | 7.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.080 |
| SRR1783600 | control | 0.108 |
| SRR1783602 | moderate drought stress | 0.085 |
| SRR1811619 | moderate drought stress | 0.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.363 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.795 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.619 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.723 |
| SRR2967015 | Control (Tissue:root) | 0.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.801 |
| SRR9715740 | Leave | 1.135 |
| SRR9715741 | Leave | 2.133 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.552 |
| SRR9715743 | Root | 1.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.390 |
| SRR8400027 | Control-Root | 1.698 |