Gene detail

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Gene detail information of Glyur001322s00037577.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63940.1	2.00E-32	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	NP_001238713.1	1.16E-66	protein kinase family protein [Glycine max]
Swissprot	tr\|Q3EDL4\|Y1154_ARATH	7.00E-18	Probable serine/threonine-protein kinase At1g01540
trEMBL	tr\|C6ZRR5\|C6ZRR5_SOYBN	4.00E-67	Protein kinase family protein {ECO:0000313\|EMBL:ACM89509.1}

Sequence

Transcript Sequence

>Glyur001322s00037577.1
ATGCAGAAAACGGTTCCAAAAAAAAAAGCCAACGACGGCGGCGGCTCCGGTGTACGGACGGTGGTGGTTGGGGTGAAGCTGGATTCCCCTAGCAAAGAGCTTCTGACGTGGGCTTTGAAAAAAAATGCTCACCCTGAAATTGTGAATAGAGATGGGAAATCGTCGCTGCTTTCTCTTGTCAAGAAAAAAAACTCTGTTCTTGCTGTTTATGAAGGATTCTGCAATTTGAAACAGGTGGGTCTAAAAAAAAAAATTTGCCGTGGTTCGTCGGTGAAGAAGATTTTGGTAAGAGAAAAAAAAGCTTATTCTGCAACTCATGTTATGGTTGGAACTGCTCAGGGCTTCCATAAGATCCGGTCATCTACCTCTGTAGCTAACTCTCCATCAAATGTTGCTGACGTACAAGGGATTGATCGTCATCAGAGAAATGGTTTGCTTGAAACTGTTAGAACTGATCAGGGCTGCTCAGTTTGTGGCCCGACCCAAAAAAAATTGCCAGACACTTCTTGCAACGAATCTGCTGAAGGGTCTTGTAAAAAAAATGGTGGCGGTGAGAATTCTTTGGCTATAGTGCCTGTACAGACAAAAAAAACAGGACAACCTGAATTGAAACCAGAAAACTTGATCGGGAAAGGAGGAAGTAGTAAGGTTTATCGAGGTTGCCTTCCTGATNGCAAAAAAAATGCTGTCAAGATCCTAAAGCCTTCTGATGATGTTTTGAAGGAAAAAAAAATGGAAATAGAAATTATCACTACCTTGCATCACAAAAACATTATTTCCCTCCTTGGGTTCTGCTTTGAGAATGGAAATCTTCTTATGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCATGATAATAGGAAAACTCTTTTGCAGGCAAGTCCAAAAAAAAATAGTGGAAAGGTGTCACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCATGAGGAGATGGAAAGGATGGTCCTAGCAGCCACTCTCTGTATCAGGCGTGCTCCAAGAGCTAGGCCTCAAATGACCCTTGTTTCAAAGCTCCTTCAAGGTGATACTGATGCAGTNAAGTGGGCAAGGCTAGAAGTAAAAAAAATGGAAGCACCAGAAATGCTGGATGATGAGGCATGTCCACCCAGTAATCTACTACAGTCACATCTTAATCTTGCACTGCTTGATGTGGAGGATAAAAAAAACTCCATGTGCAGTGTTGAGCAAAGTGTCTCGTTGGAGGACTACTTGAGAGGCAGGTGGAGCCGCTCATCAAGCTTTGACTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01322	18811	22967	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.10.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001322s00037577.1	PF07714.12	Pkinase_Tyr	206	295	1.30E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.404
SRR1783600	control	1.060
SRR1783602	moderate drought stress	1.183
SRR1811619	moderate drought stress	1.015

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.694
DRR006520	Root Summer glycyrrhizin high producing strain	0.760
DRR006521	Root Winter glycyrrhizin high producing strain	0.069
DRR006522	Root Winter glycyrrhizin high producing strain	0.188
DRR006523	Root Summer glycyrrhizin low producing strain	0.265
DRR006524	Root Summer glycyrrhizin low producing strain	0.168
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.385
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.417

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.122
SRR2868004	Drought Stress(Tissue:root)	0.268
SRR2967015	Control (Tissue:root)	0.320

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.468
SRR9715740	Leave	0.369
SRR9715741	Leave	0.219
SRR9715739	Root	2.251
SRR9715742	Root	2.890
SRR9715743	Root	2.219

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.024
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.024
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.671
SRR8400027	Control-Root	1.200