Gene detail information of Glyur001322s00037582.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59070.1 | 1.00E-132 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003628898.1 | 0 | Glycosyltransferase, putative [Medicago truncatula] |
| COG | YP_001546590.1 | 1.00E-15 | group 1 glycosyl transferase [Herpetosiphon aurantiacus DSM 785] |
| trEMBL | tr|G7LIK8|G7LIK8_MEDTR | 0 | Glycosyltransferase family 4 protein {ECO:0000313|EMBL:AET03374.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01322 | 69841 | 71797 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001322s00037582.1 | PF00534.15 | Glycos_transf_1 | 261 | 408 | 2.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.027 |
| SRR1783600 | control | 0.028 |
| SRR1783602 | moderate drought stress | 0.202 |
| SRR1811619 | moderate drought stress | 0.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.593 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.781 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.070 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.109 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.932 |
| SRR2967015 | Control (Tissue:root) | 2.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.074 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.054 |
| SRR8749028 | MeJA induced 9h | 0.068 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.042 |
| SRR8749031 | Uninduced | 0.138 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.195 |
| SRR8400027 | Control-Root | 0.349 |