Gene detail

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Gene detail information of Glyur001324s00031601.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G75290.1	6.00E-61	NAD(P)-binding Rossmann-fold superfamily protein
NR	XP_004496202.1	0	PREDICTED: leucoanthocyanidin reductase-like [Cicer arietinum]
Swissprot	tr\|Q84V83\|LAR_DESUN	0	Leucoanthocyanidin reductase
trEMBL	tr\|Q3KN75\|Q3KN75_MEDTR	0	Leucoanthocyanidin reductase LAR1-2 {ECO:0000313\|EMBL:AES62081.1}

Sequence

Transcript Sequence

>Glyur001324s00031601.1
GCCCAAAACTCTTCCCCTTTCTGCGTTACTATATACCCAGAACCAAAAAGCAGTGCAAATTATAAACGATGGCAGCATCACAAGCCATTCCAATCACCAAGGACCGAGTCTTGATTATTGGGGCAACGGGTTTCATGGGCAAGTTTGTGGCTGAGGCAAGCCTTGCCACAGCACACCCTACCTATTTGCTCATACGGCCAGGACCTCTTATCTCTTCCAAAGCTACCATTATTAAAACCTTCCAAGAGAAAGGTGCTATTGTCATTCATGGCGTGGTAAATAACAAGGACTTCGTGCAGAAGATTTTGAAAGAGTATGAAATAGACATTGTCATTTCTGCTATAGGAGCTGAAAGCATGCTGGATCAGCTTATATTGGTGGAGGCCATGAAATCTGTTAAGACTATTAAGAGGTTTTTGCCTTCAGAATTTGGGCACGACGTGGACAGGGCAGATCCTGTGGAGCCTGGTCTAGCAATGTACAAAGAGAAGCGTTTGGTTAGGCGCGCGATTGAGAAATCTGGTGTACCATACACATATATCTGTTGCAATTCCATTGCTTCTTGGCCTTACTATGACAATTGCCATCCATCACAGCTTCCTCCACCTTTGGATCAATTGCAGATATATGGTGATGGCAATGTCAAAGCTTACTTTATTGATGGCTTTGATATTGGGAAATTCACAATGAAGGTCGTTGATGATGTCAGGACACTCAACAAAAATGTTCATTTTCGACCCTCTAGCAACTGTTATAGTATGAATGATCTTGCTTCTTTATGGGAAAAGAAAATTGGTCGTAAAATCCCCNGAGTTACCATCTCTGAAGATGATCTTCTAGCAGTGTCTGCAGAGAATTGTATACCAGAAAGTGTTGTAGCATCTATCACCCATGATATCTTCATCAATGGTTGTCAAGTGAACTTCAACATAGATGGAGTTCATGACGTTGAGATTGGAACTCTCTATCCTGATGAGGCATTCAGGAGCTTGGAGGATTGCTTCAATGACTTTGTTCTCATGGCCGTTAACGAGATTCATAAAGGGGAAACTGAAGTTACCAGCAGAAAGACTTTAGTAGAAGCAGTGTCAATCACAGCTTCCTGTTGAGAAGAGTCACCTAAGAAACGTCCTATATTATTATTAGACTTTGTTGAGTCATCTGTCGTAGGATATGGGCCTCCACTTTGATGTTATTCCGAAGACTGTTTCACCTAATTATAAACCATTGTTGCTTAAGTATTTTATGACATAATATTACCTAATG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01324	67272	73892	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13081	LAR	EC:1.17.1.3	Flavonoid biosynthesis	map00941

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001324s00031601.1	PF05368.8	NmrA	14	246	2.30E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.482
SRR1783600	control	3.502
SRR1783602	moderate drought stress	4.409
SRR1811619	moderate drought stress	4.303

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.085
DRR006520	Root Summer glycyrrhizin high producing strain	0.084
DRR006521	Root Winter glycyrrhizin high producing strain	0.087
DRR006522	Root Winter glycyrrhizin high producing strain	0.086
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.711
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.591

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.107
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.107

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	17.223
SRR9715740	Leave	2.489
SRR9715741	Leave	5.733
SRR9715739	Root	2.207
SRR9715742	Root	0.550
SRR9715743	Root	1.128

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.079
SRR8749028	MeJA induced 9h	0.185
SRR8749029	MeJA induced 9h	0.016
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.030
SRR8749032	Uninduced	0.074

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.219
SRR8400027	Control-Root	0.597