Gene detail information of Glyur001326s00026353.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G39800.40delta1-pyrroline-5-carboxylate synthase 1
NRXP_003529108.20PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like isoform X1 [Glycine max]
COGYP_007082681.14.00E-119gamma-glutamyl phosphate reductase [Pleurocapsa sp. PCC 7327]
Swissprottr|O04226|P5CS_ORYSJ0Gamma-glutamyl phosphate reductase
trEMBLtr|K7L1J4|K7L1J4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G16510.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01326961918930-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12657ALDH18A1, P5CS EC:2.7.2.11 1.2.1.41 Biosynthesis of amino acids map01230
Arginine and proline metabolismmap00330


Gene Ontology

biological_process

GO:0006561  proline biosynthetic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004349  glutamate 5-kinase activity

GO:0004350  glutamate-5-semialdehyde dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001326s00026353.2PF00696.23AA_kinase132575.00E-32
Glyur001326s00026353.2PF00171.17Aldedh2915652.10E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.280
SRR1783600control17.516
SRR1783602moderate drought stress6.660
SRR1811619moderate drought stress6.716

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.445
DRR006520Root Summer glycyrrhizin high producing strain37.587
DRR006521Root Winter glycyrrhizin high producing strain13.172
DRR006522Root Winter glycyrrhizin high producing strain13.315
DRR006523Root Summer glycyrrhizin low producing strain9.328
DRR006524Root Summer glycyrrhizin low producing strain9.068
DRR006525Leaf Summer glycyrrhizin high producing strain2.190
DRR006526Leaf Summer glycyrrhizin high producing strain2.266

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.037
SRR2868004Drought Stress(Tissue:root)21.432
SRR2967015Control (Tissue:root)16.670

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.208
SRR9715740Leave2.522
SRR9715741Leave2.233
SRR9715739Root3.046
SRR9715742Root11.363
SRR9715743Root9.396

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.025
SRR8749028MeJA induced 9h18.768
SRR8749029MeJA induced 9h8.764
SRR8749030Uninduced8.202
SRR8749031Uninduced5.455
SRR8749032Uninduced5.037

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.505
SRR8400027Control-Root9.276

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved