Gene detail information of Glyur001330s00038583.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G01650.21.00E-33Tautomerase/MIF superfamily protein
NRXP_003522191.11.71E-66PREDICTED: macrophage migration inhibitory factor homolog [Glycine max]
COGYP_001017772.13.00E-09ATLS1-like light-inducible protein [Prochlorococcus marinus str. MIT 9303]
trEMBLtr|I1JL56|I1JL56_SOYBN6.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G05600.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013302096426487+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07253MIF EC:5.3.2.1 Tyrosine metabolism map00350
Phenylalanine metabolismmap00360


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001330s00038583.1PF01187.13MIF21032.90E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.630
SRR1783600control12.237
SRR1783602moderate drought stress7.414
SRR1811619moderate drought stress6.345

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.884
DRR006520Root Summer glycyrrhizin high producing strain1.367
DRR006521Root Winter glycyrrhizin high producing strain0.711
DRR006522Root Winter glycyrrhizin high producing strain1.156
DRR006523Root Summer glycyrrhizin low producing strain2.004
DRR006524Root Summer glycyrrhizin low producing strain2.790
DRR006525Leaf Summer glycyrrhizin high producing strain0.969
DRR006526Leaf Summer glycyrrhizin high producing strain0.604

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.979
SRR2868004Drought Stress(Tissue:root)25.881
SRR2967015Control (Tissue:root)18.260

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.713
SRR9715740Leave1.854
SRR9715741Leave3.433
SRR9715739Root1.159
SRR9715742Root6.777
SRR9715743Root5.020

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.517
SRR8749028MeJA induced 9h6.870
SRR8749029MeJA induced 9h14.048
SRR8749030Uninduced13.282
SRR8749031Uninduced5.718
SRR8749032Uninduced5.243

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.915
SRR8400027Control-Root11.221

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved