Gene detail information of Glyur001338s00034122.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26170.1 | 1.00E-12 | WRKY DNA-binding protein 50 |
| NR | XP_003588914.1 | 1.11E-39 | WRKY transcription factor [Medicago truncatula] |
| Swissprot | tr|Q8VWQ5|WRK50_ARATH | 3.00E-15 | Probable WRKY transcription factor 50 |
| trEMBL | tr|G7I8Z5|G7I8Z5_MEDTR | 4.00E-40 | WRKY family transcription factor {ECO:0000313|EMBL:AES59165.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01338 | 10298 | 12889 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001338s00034122.1 | PF03106.10 | WRKY | 109 | 130 | 1.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.481 |
| SRR1783600 | control | 0.076 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.222 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.343 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.555 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.563 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.794 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.847 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.187 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.432 |
| SRR2967015 | Control (Tissue:root) | 0.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.478 |
| SRR9715740 | Leave | 1.047 |
| SRR9715741 | Leave | 1.612 |
| SRR9715739 | Root | 0.481 |
| SRR9715742 | Root | 0.172 |
| SRR9715743 | Root | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.059 |
| SRR8749028 | MeJA induced 9h | 0.336 |
| SRR8749029 | MeJA induced 9h | 0.380 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.396 |
| SRR8749032 | Uninduced | 0.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.021 |