Gene detail information of Glyur001339s00035231.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G15220.10Protein kinase superfamily protein
NRXP_003540120.10PREDICTED: serine/threonine-protein kinase dst2-like isoformX1 [Glycine max]
COGYP_003298703.11.00E-21serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
Swissprottr|Q9CAD5|YODA_ARATH9.00E-48Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|K7LV79|K7LV79_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G27300.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013394020157080-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001339s00035231.2PF00069.20Pkinase141351.00E-30
Glyur001339s00035231.2PF00069.20Pkinase1482441.70E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.255
SRR1783600control10.372
SRR1783602moderate drought stress10.726
SRR1811619moderate drought stress10.523

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.595
DRR006520Root Summer glycyrrhizin high producing strain25.322
DRR006521Root Winter glycyrrhizin high producing strain15.477
DRR006522Root Winter glycyrrhizin high producing strain15.531
DRR006523Root Summer glycyrrhizin low producing strain26.657
DRR006524Root Summer glycyrrhizin low producing strain26.673
DRR006525Leaf Summer glycyrrhizin high producing strain9.236
DRR006526Leaf Summer glycyrrhizin high producing strain9.206

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.810
SRR2868004Drought Stress(Tissue:root)21.356
SRR2967015Control (Tissue:root)21.285

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.377
SRR9715740Leave22.154
SRR9715741Leave28.331
SRR9715739Root3.699
SRR9715742Root16.367
SRR9715743Root12.760

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.797
SRR8749028MeJA induced 9h17.098
SRR8749029MeJA induced 9h9.849
SRR8749030Uninduced6.373
SRR8749031Uninduced3.132
SRR8749032Uninduced4.213

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.897
SRR8400027Control-Root23.583

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved