Gene detail information of Glyur001347s00032235.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.11.00E-77alcohol dehydrogenase 1
NRXP_010038347.11.04E-129PREDICTED: alcohol dehydrogenase 3-like isoform X1 [Eucalyptus grandis]
COGYP_001342516.13.00E-72S-(hydroxymethyl)glutathione dehydrogenase [Marinomonas sp. MWYL1]
Swissprottr|P28032|ADH2_SOLLC3.00E-122Alcohol dehydrogenase 2
trEMBLtr|A0A061DPI7|A0A061DPI7_THECC4.00E-130Alcohol dehydrogenase 1 {ECO:0000313|EMBL:EOX94006.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013471387123898+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001347s00032235.2PF08240.7ADH_N361161.20E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control62.708
SRR1783600control63.609
SRR1783602moderate drought stress47.132
SRR1811619moderate drought stress46.242

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain73.050
DRR006520Root Summer glycyrrhizin high producing strain72.460
DRR006521Root Winter glycyrrhizin high producing strain75.788
DRR006522Root Winter glycyrrhizin high producing strain73.010
DRR006523Root Summer glycyrrhizin low producing strain69.016
DRR006524Root Summer glycyrrhizin low producing strain68.462
DRR006525Leaf Summer glycyrrhizin high producing strain4.917
DRR006526Leaf Summer glycyrrhizin high producing strain4.622

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.939
SRR2868004Drought Stress(Tissue:root)4.714
SRR2967015Control (Tissue:root)8.296

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.862
SRR9715740Leave1.868
SRR9715741Leave1.507
SRR9715739Root10.409
SRR9715742Root15.059
SRR9715743Root10.549

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.677
SRR8749028MeJA induced 9h7.639
SRR8749029MeJA induced 9h4.235
SRR8749030Uninduced0.998
SRR8749031Uninduced0.205
SRR8749032Uninduced1.272

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.820
SRR8400027Control-Root43.863

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved