Gene detail information of Glyur001349s00028254.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31990.20aspartate aminotransferase 5
NRXP_004498776.10PREDICTED: aspartate aminotransferase P2, mitochondrial-like [Cicer arietinum]
COGYP_004421156.14.00E-119aromatic amino acid aminotransferase [Gallibacterium anatis UMN179]
Swissprottr|P26563|AATM_LUPAN0Aspartate aminotransferase P2, mitochondrial (Precursor; Fragment)
trEMBLtr|O22618|O22618_LOTCO0Aspartate aminotransferase {ECO:0000256|RuleBase:RU000480}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013496084165248-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00811ASP5 EC:2.6.1.1 2-Oxocarboxylic acid metabolism map01210
Biosynthesis of amino acidsmap01230
Alanine, aspartate and glutamate metabolismmap00250
Cysteine and methionine metabolismmap00270
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Isoquinoline alkaloid biosynthesismap00950
Tropane, piperidine and pyridine alkaloid biosynthesismap00960


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0008483  transaminase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001349s00028254.1PF00155.16Aminotran_1_21385046.40E-92


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.211
SRR1783600control58.238
SRR1783602moderate drought stress48.049
SRR1811619moderate drought stress47.460

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.252
DRR006520Root Summer glycyrrhizin high producing strain60.381
DRR006521Root Winter glycyrrhizin high producing strain83.610
DRR006522Root Winter glycyrrhizin high producing strain81.539
DRR006523Root Summer glycyrrhizin low producing strain90.295
DRR006524Root Summer glycyrrhizin low producing strain89.585
DRR006525Leaf Summer glycyrrhizin high producing strain78.138
DRR006526Leaf Summer glycyrrhizin high producing strain77.690

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)121.722
SRR2868004Drought Stress(Tissue:root)91.509
SRR2967015Control (Tissue:root)84.069

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave98.082
SRR9715740Leave103.266
SRR9715741Leave98.012
SRR9715739Root14.030
SRR9715742Root40.748
SRR9715743Root35.735

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h55.159
SRR8749028MeJA induced 9h92.563
SRR8749029MeJA induced 9h75.780
SRR8749030Uninduced96.742
SRR8749031Uninduced89.270
SRR8749032Uninduced85.768

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root128.352
SRR8400027Control-Root114.760

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved