Gene detail information of Glyur001359s00026912.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67550.10urease
NRXP_004502315.10PREDICTED: urease-like [Cicer arietinum]
COGYP_003590013.10urease subunit alpha [Kyrpidia tusciae DSM 2912]
Swissprottr|P07374|UREA_CANEN0Urease
trEMBLtr|I3PA93|I3PA93_CAJCA0Urease {ECO:0000256|PIRNR:PIRNR001222}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013591513325513+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01427URE EC:3.5.1.5 Purine metabolism map00230
Arginine biosynthesismap00220
Atrazine degradationmap00791


Gene Ontology

biological_process

GO:0006807  nitrogen compound metabolic process

GO:0043419  urea catabolic process


molecular_function

GO:0009039  urease activity

GO:0016151  nickel cation binding

GO:0016787  hydrolase activity

GO:0016810  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001359s00026912.1PF00547.13Urease_gamma1915.80E-33
Glyur001359s00026912.1PF00699.15Urease_beta1242222.10E-39
Glyur001359s00026912.1PF00449.15Urease_alpha2633813.00E-53
Glyur001359s00026912.1PF01979.15Amidohydro_14986534.00E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control37.718
SRR1783600control37.518
SRR1783602moderate drought stress29.520
SRR1811619moderate drought stress29.860

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.346
DRR006520Root Summer glycyrrhizin high producing strain26.265
DRR006521Root Winter glycyrrhizin high producing strain1.666
DRR006522Root Winter glycyrrhizin high producing strain1.609
DRR006523Root Summer glycyrrhizin low producing strain18.945
DRR006524Root Summer glycyrrhizin low producing strain19.002
DRR006525Leaf Summer glycyrrhizin high producing strain1.823
DRR006526Leaf Summer glycyrrhizin high producing strain1.840

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.776
SRR2868004Drought Stress(Tissue:root)22.971
SRR2967015Control (Tissue:root)21.241

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.987
SRR9715740Leave3.099
SRR9715741Leave3.215
SRR9715739Root4.688
SRR9715742Root26.562
SRR9715743Root22.877

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.409
SRR8749028MeJA induced 9h13.733
SRR8749029MeJA induced 9h6.587
SRR8749030Uninduced15.650
SRR8749031Uninduced11.155
SRR8749032Uninduced6.054

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.913
SRR8400027Control-Root36.286

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved