Gene detail information of Glyur001360s00037390.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT4G34050.1 | 8.00E-109 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
NR | AGV54319.1 | 2.40E-155 | caffeoyl CoA O-methyltransferase [Phaseolus vulgaris] |
COG | YP_007108508.1 | 2.00E-60 | O-methyltransferase family protein [Geitlerinema sp. PCC 7407] |
Swissprot | tr|Q40313|CAMT_MEDSA | 2.00E-138 | Caffeoyl-CoA O-methyltransferase |
trEMBL | tr|T2DPE8|T2DPE8_PHAVU | 9.00E-156 | Caffeoyl CoA O-methyltransferase {ECO:0000313|EMBL:AGV54717.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold01360 | 44849 | 47359 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K00588 | E2.1.1.104 | EC:2.1.1.104 | Phenylalanine metabolism | map00360 |
Phenylpropanoid biosynthesis | map00940 | |||
Stilbenoid, diarylheptanoid and gingerol biosynthesis | map00945 | |||
Flavonoid biosynthesis | map00941 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur001360s00037390.1 | PF01596.12 | Methyltransf_3 | 36 | 247 | 2.60E-89 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 73.433 |
SRR1783600 | control | 73.662 |
SRR1783602 | moderate drought stress | 55.634 |
SRR1811619 | moderate drought stress | 54.434 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 50.352 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 49.787 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 8.301 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 8.138 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 62.246 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 62.567 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.447 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.823 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 271.526 |
SRR2868004 | Drought Stress(Tissue:root) | 227.713 |
SRR2967015 | Control (Tissue:root) | 172.420 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 11.823 |
SRR9715740 | Leave | 23.264 |
SRR9715741 | Leave | 13.155 |
SRR9715739 | Root | 50.712 |
SRR9715742 | Root | 53.403 |
SRR9715743 | Root | 56.813 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 270.252 |
SRR8749028 | MeJA induced 9h | 169.358 |
SRR8749029 | MeJA induced 9h | 156.310 |
SRR8749030 | Uninduced | 143.493 |
SRR8749031 | Uninduced | 70.775 |
SRR8749032 | Uninduced | 103.399 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 172.470 |
SRR8400027 | Control-Root | 166.561 |