Gene detail information of Glyur001360s00037390.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G34050.18.00E-109S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRAGV54319.12.40E-155caffeoyl CoA O-methyltransferase [Phaseolus vulgaris]
COGYP_007108508.12.00E-60O-methyltransferase family protein [Geitlerinema sp. PCC 7407]
Swissprottr|Q40313|CAMT_MEDSA2.00E-138Caffeoyl-CoA O-methyltransferase
trEMBLtr|T2DPE8|T2DPE8_PHAVU9.00E-156Caffeoyl CoA O-methyltransferase {ECO:0000313|EMBL:AGV54717.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013604484947359+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00588E2.1.1.104 EC:2.1.1.104 Phenylalanine metabolism map00360
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0008171  O-methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001360s00037390.1PF01596.12Methyltransf_3362472.60E-89


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control73.433
SRR1783600control73.662
SRR1783602moderate drought stress55.634
SRR1811619moderate drought stress54.434

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain50.352
DRR006520Root Summer glycyrrhizin high producing strain49.787
DRR006521Root Winter glycyrrhizin high producing strain8.301
DRR006522Root Winter glycyrrhizin high producing strain8.138
DRR006523Root Summer glycyrrhizin low producing strain62.246
DRR006524Root Summer glycyrrhizin low producing strain62.567
DRR006525Leaf Summer glycyrrhizin high producing strain8.447
DRR006526Leaf Summer glycyrrhizin high producing strain7.823

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)271.526
SRR2868004Drought Stress(Tissue:root)227.713
SRR2967015Control (Tissue:root)172.420

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.823
SRR9715740Leave23.264
SRR9715741Leave13.155
SRR9715739Root50.712
SRR9715742Root53.403
SRR9715743Root56.813

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h270.252
SRR8749028MeJA induced 9h169.358
SRR8749029MeJA induced 9h156.310
SRR8749030Uninduced143.493
SRR8749031Uninduced70.775
SRR8749032Uninduced103.399

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root172.470
SRR8400027Control-Root166.561