Gene detail information of Glyur001366s00034400.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G69740.23.00E-170Aldolase superfamily protein
NRXP_011027511.10PREDICTED: delta-aminolevulinic acid dehydratase, chloroplastic [Populus euphratica]
COGYP_007045970.17.00E-133delta-aminolevulinic acid dehydratase [Cyanobium gracile PCC 6307]
Swissprottr|P43210|HEM2_SOYBN0Delta-aminolevulinic acid dehydratase, chloroplastic (Precursor)
trEMBLtr|V5N8K3|V5N8K3_PHAVU0Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013664031848084+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01698hemB, ALAD EC:4.2.1.24 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0033014  tetrapyrrole biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004655  porphobilinogen synthase activity

GO:0046872  metal ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001366s00034400.1PF00490.16ALAD873977.90E-130


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.068
SRR1783600control40.454
SRR1783602moderate drought stress29.156
SRR1811619moderate drought stress28.969

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.583
DRR006520Root Summer glycyrrhizin high producing strain41.462
DRR006521Root Winter glycyrrhizin high producing strain24.746
DRR006522Root Winter glycyrrhizin high producing strain24.085
DRR006523Root Summer glycyrrhizin low producing strain27.379
DRR006524Root Summer glycyrrhizin low producing strain29.602
DRR006525Leaf Summer glycyrrhizin high producing strain83.606
DRR006526Leaf Summer glycyrrhizin high producing strain83.188

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.254
SRR2868004Drought Stress(Tissue:root)32.895
SRR2967015Control (Tissue:root)31.776

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave109.003
SRR9715740Leave115.377
SRR9715741Leave98.126
SRR9715739Root30.921
SRR9715742Root35.475
SRR9715743Root33.749

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.127
SRR8749028MeJA induced 9h43.591
SRR8749029MeJA induced 9h40.514
SRR8749030Uninduced66.580
SRR8749031Uninduced53.147
SRR8749032Uninduced58.853

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.929
SRR8400027Control-Root53.840

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved