Gene detail information of Glyur001376s00030054.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17520.10Endoribonuclease/protein kinase IRE1-like
NRXP_004509458.10PREDICTED: serine/threonine-protein kinase ppk4-like [Cicer arietinum]
COGYP_007162414.18.00E-19serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605]
Swissprottr|Q9C5S2|IRE1A_ARATH0Endoribonuclease (Precursor)
trEMBLtr|K7LEW9|K7LEW9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32970.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013762683635935-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.3.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08852ERN1 EC:2.7.11.1 3.1.26.- Protein processing in endoplasmic reticulum map04141
Autophagy - animalmap04140
Apoptosismap04210
Alzheimer's diseasemap05010
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0006397  mRNA processing

GO:0006468  protein phosphorylation


molecular_function

GO:0004540  ribonuclease activity

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001376s00030054.1PF00069.20Pkinase5057895.00E-40
Glyur001376s00030054.1PF06479.7Ribonuc_2-5A7959221.10E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.507
SRR1783600control7.472
SRR1783602moderate drought stress10.318
SRR1811619moderate drought stress10.223

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.248
DRR006520Root Summer glycyrrhizin high producing strain10.970
DRR006521Root Winter glycyrrhizin high producing strain15.502
DRR006522Root Winter glycyrrhizin high producing strain14.762
DRR006523Root Summer glycyrrhizin low producing strain15.997
DRR006524Root Summer glycyrrhizin low producing strain15.760
DRR006525Leaf Summer glycyrrhizin high producing strain8.829
DRR006526Leaf Summer glycyrrhizin high producing strain8.851

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.988
SRR2868004Drought Stress(Tissue:root)16.866
SRR2967015Control (Tissue:root)19.250

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.871
SRR9715740Leave10.556
SRR9715741Leave13.333
SRR9715739Root1.114
SRR9715742Root7.027
SRR9715743Root6.699

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.128
SRR8749028MeJA induced 9h27.084
SRR8749029MeJA induced 9h14.679
SRR8749030Uninduced11.516
SRR8749031Uninduced22.282
SRR8749032Uninduced17.794

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.525
SRR8400027Control-Root12.431

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved