Gene detail information of Glyur001379s00029171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G40870.10uridine kinase/uracil phosphoribosyltransferase 1
NRXP_007161986.10hypothetical protein PHAVU_001G114500g [Phaseolus vulgaris]
COGYP_004456885.17.00E-56uridine kinase [Melissococcus plutonius ATCC 35311]
Swissprottr|Q9FKS0|UKL1_ARATH0Putative uracil phosphoribosyltransferase (Precursor)
trEMBLtr|V7CXG7|V7CXG7_PHAVU0Uridine kinase {ECO:0000256|RuleBase:RU003825}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013796132569421+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00876udk, UCK EC:2.7.1.48 Pyrimidine metabolism map00240
Drug metabolism - other enzymesmap00983


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0044206  UMP salvage


molecular_function

GO:0004849  uridine kinase activity

GO:0005524  ATP binding

GO:0016301  kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001379s00029171.1PF00485.13PRK822272.60E-39
Glyur001379s00029171.1PF14681.1UPRTase2574583.80E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control35.162
SRR1783600control35.196
SRR1783602moderate drought stress30.032
SRR1811619moderate drought stress30.056

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.810
DRR006520Root Summer glycyrrhizin high producing strain42.325
DRR006521Root Winter glycyrrhizin high producing strain23.735
DRR006522Root Winter glycyrrhizin high producing strain23.759
DRR006523Root Summer glycyrrhizin low producing strain41.976
DRR006524Root Summer glycyrrhizin low producing strain41.301
DRR006525Leaf Summer glycyrrhizin high producing strain20.713
DRR006526Leaf Summer glycyrrhizin high producing strain20.460

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)59.668
SRR2868004Drought Stress(Tissue:root)49.135
SRR2967015Control (Tissue:root)46.512

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.155
SRR9715740Leave35.244
SRR9715741Leave39.874
SRR9715739Root12.638
SRR9715742Root30.956
SRR9715743Root26.485

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h42.225
SRR8749028MeJA induced 9h39.540
SRR8749029MeJA induced 9h36.696
SRR8749030Uninduced18.893
SRR8749031Uninduced16.330
SRR8749032Uninduced21.049

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.266
SRR8400027Control-Root48.464

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved