Gene detail

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Gene detail information of Glyur001381s00036127.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G09270.1	1.00E-56	glutathione S-transferase TAU 8
NR	XP_004492381.1	4.90E-174	PREDICTED: glutathione S-transferase L2, chloroplastic-like [Cicer arietinum]
COG	YP_007147498.1	9.00E-17	glutathione S-transferase [Cylindrospermum stagnale PCC 7417]
Swissprot	tr\|P32110\|GSTX6_SOYBN	2.00E-125	Probable glutathione S-transferase
trEMBL	tr\|C6T5M2\|C6T5M2_SOYBN	1.00E-123	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU17044.1}

Sequence

Transcript Sequence

>Glyur001381s00036127.1
TTAGGACTCTCAGACCAATACAAANTGNGAAATTACTTTATAGTTGTTCAAGTCAAGATAATTGAGGTGTTACAATGGCTGCATCTGAAGGAGAGGTAAAGCTTTTGGGAGTTGTGGGAAGCCCATTTGTGTGCAGGGTGCAGATTGCTCTCAAGTTGAAGGGAGTTGAATACNAATTTCTGGAAGAACACTTGGGCAACAAGAGTGATCTGCTCCTCAAATATAACCCAGTTCATAAGAAGGTTCCTGTGTTTGTTCACAATGAGAAGCCCATCTCAGAGTCCCTTGTGATTGTTGAGTACATTGATGAGACTTGGAAACAAAACCCCATCTTGCCTGTTGATCCTTACCAGAGAGCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGACAAGGTCGTGACTGCTTCATCTCAAGCTGTTTTTACTGTTGATGAGAAAGAGCGTGAGAAGAATCTTGGAGAGGCATTTGTGGCTCTGCAGTTTCTTGAGAATGAGCTAAAGAGCAAGTTCTTTGGGGGAGAGGAGTTTGGCTTTGTNGACATTGCTGCTGTCTTCATAGCATTTTGGATCCCTCTATTTCAAGATATAACTGGGCTGCAATTGTTGACCAGTGAAAAGTTTCCTAAGCTTTACAAGTGGAGCCGAGAATTTCTGAACCACCCAATTGTCAAAGAAACTCTGCCTCCTAGAGACCCACTTTTTGCCTTTTTCAAAGCTCGCTATGAAATTAAGATTTCAGTCAAAATCATATATATAATCCGGGATTTCTCCTATCGTTTGACTCAATTTCTGGAAGAAAACTTGACAAACAAGAGTGACCTGCTCCTAAAATATAACCCAGTTCATAAGAAAATTTCTGTGTTGGTTCACAATGAGAAGTCCATCTCAGAGTTCCTTGTGATTGTTGAGTATATTGATGAGACCTGGAAACACAACCCCATTTTGCCTGTTGATCCTTACCAAAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATAGATGACAAGGTCGTGCCTGCTTTGCATCAAGCTGTTTTTGCTGTTGATGAGAAAGAGCGTGAGAAGAATCTTGGAGAGGTATATGAGGATCTGCAGTTTCTAGAGAATGAGCTAAAGAACAAGTTCTTTGGGGGAGAGGACATTTTGGTGAGAAGTTTCCCAAGCTTTACAAGTGGAGCCAAGAATTTATCAGCCACCCAGTTACCAAAGAAACTCTGCCTCCTAGAGACCCACTTTTTGCATTTTTCAAAGCTCGCTATGAGAATCTTCATGCTTCAAAATAGATTTGTTGCAATGGCTGCATCTGAGGGAGAGGTAAAGCTTTTGGGAGCTGTGGAAAGCCCNTTTGTGTGCAGGGTGAAGATCGCTCTCAAGTTGAAAGGAGTTGAATACCAATTTCTAGAAGAAAACTTGACAAACAAGAGTGACCTGCTCCTCAAATATAATCCAGTTCATAAGAAGGTTCCTGTGTTTGTTCACAATAAGAAGCCCATCTCAGAGTCTCTTGTGATTGTTGAGTATATTGATGAGACCTGGAAACACAACCCCATTTTGCCTGTTGACCCTTACCAAAGAGCCTTGGCTCGTTTCTGGTCCAAGTTCATTGATGACAAGGTNGTGACTGCTTCGATTCAAACTATTTTTACTGTTGATGAGAAAGAGCGTGAGAAGAATCTTGGAGAGGCACTTGAGGCTNTGCAGTTTCTTGAGANTGAGCTNAAGGACAAGTTCTTTGGGGGAGAGGAGTTTGGCTTTGNGGACATTGCTGCTGTCTTCATAGCATTTTGGATCCCTCTAATTCAAGACATAACTGGGCTGCAATTTTTGACCAGTGATAAGTTTCCCAAGCTTTACAGGTGGAGCCAAGAATTTATGAACCACCCAATTGTCAAAGAAACTCTGCCTCCCAGAGACCCACTTTTAGCCTTTTACAAAGCTCACTATGAGAGGAGAGGTAAAGCTTTTAGGAGCTGTGCAAAGCCCATTTGTGTGCAGGGTGTAGATTGCTCTCAAGTTGAAGGGAGTTTTTTTGAATACCAATACCAATTTCTCGAAGAAAACTTGAGACCCAAGAGTGATCTGCTTCTCAAATATAACCCAGTTCATAAGAAAATTCCTGTGTTTGTACACAATGAGAAGCCCATCTCAGAGTCCCTTGTGATTGTTGAGTACATTGATGAGACTTGGAAGCACAACCCCATCTTGCCTGTTGATCCTTACAAGAGAGTCTTAGCTCGTTTCTTGTCCAAATTCATAGATGACAAGAAAGAGCGTGAGAAGAATCTTGGCGAGTCATATGACGTTCTGCAGTTTCTTGAGAATGAGCTAAAGATCAAGTTCTTTGGGGGAGAGGAGTTTGGCTTTGTGGATATTGCTGCTGTCTTCATAGCATTTTGGGTCCCTCTAATTCAAGAGATGGTTGGGTTGGAGTTGTTGACTAGTGAGAAGTTTCCCAAGCTTTACAAGTGGAGTCAAGAATTCCTTAACCACCCACTTATCAAAGAAACTCGGCCTCCTAGAGACCCACTTTGTAATACCCCTATTTATAGAATTCTGTGTGCTAGTGATTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01381	21272	39296	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00799	GST, gst	EC:2.5.1.18	Glutathione metabolism	map00480
			Metabolism of xenobiotics by cytochrome P450	map00980
			Drug metabolism - cytochrome P450	map00982
			Chemical carcinogenesis	map05204
			Fluid shear stress and atherosclerosis	map05418
			Platinum drug resistance	map01524

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001381s00036127.1	PF13417.1	GST_N_3	10	82	1.40E-14
Glyur001381s00036127.1	PF00043.20	GST_C	99	197	3.90E-14
Glyur001381s00036127.1	PF13417.1	GST_N_3	416	487	2.10E-14
Glyur001381s00036127.1	PF00043.20	GST_C	505	603	3.20E-12
Glyur001381s00036127.1	PF02798.15	GST_N	652	702	5.40E-07
Glyur001381s00036127.1	PF00043.20	GST_C	728	806	2.30E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.183
SRR1783600	control	11.190
SRR1783602	moderate drought stress	1.576
SRR1811619	moderate drought stress	1.633

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.862
DRR006520	Root Summer glycyrrhizin high producing strain	17.236
DRR006521	Root Winter glycyrrhizin high producing strain	1.586
DRR006522	Root Winter glycyrrhizin high producing strain	1.585
DRR006523	Root Summer glycyrrhizin low producing strain	55.601
DRR006524	Root Summer glycyrrhizin low producing strain	53.764
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.930
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.295

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	58.374
SRR2868004	Drought Stress(Tissue:root)	121.181
SRR2967015	Control (Tissue:root)	108.239

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	376.844
SRR9715740	Leave	236.811
SRR9715741	Leave	616.459
SRR9715739	Root	13.260
SRR9715742	Root	55.300
SRR9715743	Root	43.671

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	100.419
SRR8749028	MeJA induced 9h	109.564
SRR8749029	MeJA induced 9h	103.186
SRR8749030	Uninduced	35.377
SRR8749031	Uninduced	22.112
SRR8749032	Uninduced	21.491

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	56.445
SRR8400027	Control-Root	59.231