Gene detail information of Glyur001382s00031052.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18580.10galacturonosyltransferase 11
NRKEH32050.10CAZy family GT8 glycosyltransferase [Medicago truncatula]
COGYP_007080337.12.00E-06LPS:glycosyltransferase [Pleurocapsa sp. PCC 7327]
Swissprottr|Q949Q1|GAUTB_ARATH0Probable galacturonosyltransferase 11
trEMBLtr|A0A072V1Q3|A0A072V1Q3_MEDTR0CAZy family GT8 glycosyltransferase {ECO:0000313|EMBL:KEH32050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold013824364947616+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13648GAUT EC:2.4.1.43 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001382s00031052.1PF01501.15Glyco_transf_82395103.70E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.344
SRR1783600control7.467
SRR1783602moderate drought stress4.226
SRR1811619moderate drought stress4.200

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.803
DRR006520Root Summer glycyrrhizin high producing strain11.629
DRR006521Root Winter glycyrrhizin high producing strain3.145
DRR006522Root Winter glycyrrhizin high producing strain3.079
DRR006523Root Summer glycyrrhizin low producing strain15.585
DRR006524Root Summer glycyrrhizin low producing strain15.618
DRR006525Leaf Summer glycyrrhizin high producing strain0.818
DRR006526Leaf Summer glycyrrhizin high producing strain0.807

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.158
SRR2868004Drought Stress(Tissue:root)3.529
SRR2967015Control (Tissue:root)4.389

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.468
SRR9715740Leave0.604
SRR9715741Leave2.642
SRR9715739Root6.015
SRR9715742Root13.129
SRR9715743Root12.296

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.299
SRR8749028MeJA induced 9h13.112
SRR8749029MeJA induced 9h9.913
SRR8749030Uninduced6.377
SRR8749031Uninduced1.623
SRR8749032Uninduced1.817

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.868
SRR8400027Control-Root5.300

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved