Gene detail information of Glyur001396s00035591.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74590.1 | 2.00E-54 | glutathione S-transferase TAU 10 |
| NR | XP_003613754.1 | 4.49E-116 | Glutathione S-transferase [Medicago truncatula] |
| COG | NP_102792.1 | 4.00E-15 | glutathione S-transferase [Mesorhizobium loti MAFF303099] |
| Swissprot | tr|Q9CA57|GSTUA_ARATH | 1.00E-68 | Glutathione S-transferase U10 |
| trEMBL | tr|G7KDY4|G7KDY4_MEDTR | 2.00E-116 | Uncharacterized protein {ECO:0000313|EMBL:AFK38290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01396 | 56177 | 57594 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001396s00035591.1 | PF13417.1 | GST_N_3 | 10 | 81 | 1.00E-16 |
| Glyur001396s00035591.1 | PF00043.20 | GST_C | 101 | 202 | 7.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.100 |
| SRR1783600 | control | 0.051 |
| SRR1783602 | moderate drought stress | 0.054 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.018 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.248 |
| SRR2967015 | Control (Tissue:root) | 5.376 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.961 |
| SRR8749028 | MeJA induced 9h | 13.668 |
| SRR8749029 | MeJA induced 9h | 9.142 |
| SRR8749030 | Uninduced | 9.759 |
| SRR8749031 | Uninduced | 19.418 |
| SRR8749032 | Uninduced | 3.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.471 |
| SRR8400027 | Control-Root | 0.104 |