Gene detail information of Glyur001401s00032464.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05010.12.00E-133ethylene-forming enzyme
NRAAD28196.201-aminocyclopropane-1-carboxylate oxidase [Trifolium repens]
COGYP_003514298.16.00E-302OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Swissprottr|P31237|ACCO_ACTDE01-aminocyclopropane-1-carboxylate oxidase
trEMBLtr|Q9XER2|Q9XER2_TRIRP0ACC oxidase {ECO:0000313|EMBL:ABB97396.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014015268856233-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05933E1.14.17.4 EC:1.14.17.4 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001401s00032464.1PF14226.1DIOX_N521431.30E-18
Glyur001401s00032464.1PF03171.152OG-FeII_Oxy2043003.70E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.682
SRR1783600control31.960
SRR1783602moderate drought stress19.645
SRR1811619moderate drought stress19.440

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.727
DRR006520Root Summer glycyrrhizin high producing strain26.060
DRR006521Root Winter glycyrrhizin high producing strain1.129
DRR006522Root Winter glycyrrhizin high producing strain1.022
DRR006523Root Summer glycyrrhizin low producing strain53.153
DRR006524Root Summer glycyrrhizin low producing strain52.702
DRR006525Leaf Summer glycyrrhizin high producing strain42.317
DRR006526Leaf Summer glycyrrhizin high producing strain42.671

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)412.797
SRR2868004Drought Stress(Tissue:root)319.149
SRR2967015Control (Tissue:root)390.031

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.448
SRR9715740Leave16.971
SRR9715741Leave86.362
SRR9715739Root1.832
SRR9715742Root23.505
SRR9715743Root21.090

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root87.775
SRR8400027Control-Root40.721

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved