Gene detail information of Glyur001404s00041099.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03370.1 | 4.00E-22 | acylphosphatase family |
| NR | KEH42193.1 | 7.06E-43 | acylphosphatase [Medicago truncatula] |
| COG | YP_522717.1 | 1.00E-13 | acylphosphatase [Albidiferax ferrireducens T118] |
| trEMBL | tr|A0A072VL74|A0A072VL74_MEDTR | 3.00E-43 | Acylphosphatase {ECO:0000313|EMBL:KEH42193.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01404 | 19605 | 21731 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01512 | acyP | EC:3.6.1.7 | Pyruvate metabolism | map00620 |
| Aminobenzoate degradation | map00627 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001404s00041099.1 | PF00708.13 | Acylphosphatase | 79 | 140 | 4.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.469 |
| SRR1783600 | control | 10.763 |
| SRR1783602 | moderate drought stress | 14.159 |
| SRR1811619 | moderate drought stress | 14.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.837 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.239 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.054 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.327 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.649 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.009 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.683 |
| SRR2967015 | Control (Tissue:root) | 4.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.187 |
| SRR9715740 | Leave | 9.532 |
| SRR9715741 | Leave | 9.217 |
| SRR9715739 | Root | 2.940 |
| SRR9715742 | Root | 4.306 |
| SRR9715743 | Root | 4.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.188 |
| SRR8749028 | MeJA induced 9h | 3.717 |
| SRR8749029 | MeJA induced 9h | 2.205 |
| SRR8749030 | Uninduced | 0.536 |
| SRR8749031 | Uninduced | 0.771 |
| SRR8749032 | Uninduced | 1.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.993 |
| SRR8400027 | Control-Root | 4.617 |