Gene detail information of Glyur001406s00030094.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10670.46.00E-12ATP-citrate lyase A-1
NRKHN14562.15.58E-14ATP-citrate synthase alpha chain protein 1 [Glycine soja]
Swissprottr|Q9SGY2|ACLA1_ARATH3.00E-13ATP-citrate synthase alpha chain protein 1
trEMBLtr|I1J574|I1J574_SOYBN2.00E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G03530.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014063558341466+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09843E1.14.13.93 EC:1.14.13.93 Carotenoid biosynthesis map00906


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.833
SRR1783600control7.025
SRR1783602moderate drought stress19.525
SRR1811619moderate drought stress18.649

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.053
DRR006520Root Summer glycyrrhizin high producing strain6.466
DRR006521Root Winter glycyrrhizin high producing strain11.471
DRR006522Root Winter glycyrrhizin high producing strain10.115
DRR006523Root Summer glycyrrhizin low producing strain6.571
DRR006524Root Summer glycyrrhizin low producing strain8.226
DRR006525Leaf Summer glycyrrhizin high producing strain2.375
DRR006526Leaf Summer glycyrrhizin high producing strain2.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.349
SRR2868004Drought Stress(Tissue:root)13.569
SRR2967015Control (Tissue:root)10.392

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.624
SRR9715740Leave1.880
SRR9715741Leave5.239
SRR9715739Root0.693
SRR9715742Root2.754
SRR9715743Root2.165

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.589
SRR8749028MeJA induced 9h6.115
SRR8749029MeJA induced 9h2.552
SRR8749030Uninduced6.890
SRR8749031Uninduced7.491
SRR8749032Uninduced4.213

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.491
SRR8400027Control-Root8.828

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved