Gene detail information of Glyur001410s00029896.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67030.1 | 7.00E-15 | zinc finger protein 6 |
| NR | XP_004492954.1 | 3.43E-45 | PREDICTED: zinc finger protein 6-like [Cicer arietinum] |
| Swissprot | tr|Q39265|ZFP6_ARATH | 2.00E-29 | Zinc finger protein 6 |
| trEMBL | tr|C6T4P2|C6T4P2_SOYBN | 2.00E-40 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16652.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01410 | 3625 | 4194 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.429 |
| SRR1783600 | control | 1.437 |
| SRR1783602 | moderate drought stress | 1.551 |
| SRR1811619 | moderate drought stress | 1.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.697 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.173 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.701 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.082 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.695 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.441 |
| SRR2967015 | Control (Tissue:root) | 4.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.174 |
| SRR9715742 | Root | 0.054 |
| SRR9715743 | Root | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.250 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.171 |
| SRR8749030 | Uninduced | 0.222 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.339 |
| SRR8400027 | Control-Root | 6.119 |