Gene detail information of Glyur001413s00028474.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04870.13.00E-88cardiolipin synthase
NRXP_004486123.10PREDICTED: cardiolipin synthase-like [Cicer arietinum]
COGYP_002297765.12.00E-22CDP-alcohol phosphatidyltransferase [Rhodospirillum centenum SW]
Swissprottr|Q93YW7|CLS_ARATH1.00E-123Cardiolipin synthase, mitochondrial (Precursor)
trEMBLtr|A0A072VFA4|A0A072VFA4_MEDTR1.00E-169Phosphatidylglycerolphosphate synthase {ECO:0000313|EMBL:KEH36825.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014135439457392-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08744CRLS EC:2.7.8.41 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0008654  phospholipid biosynthetic process


cellular_component

GO:0016020  membrane


molecular_function

GO:0016780  phosphotransferase activity, for other substituted phosphate groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001413s00028474.1PF01066.16CDP-OH_P_transf1242081.40E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.448
SRR1783600control17.016
SRR1783602moderate drought stress16.958
SRR1811619moderate drought stress16.457

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.466
DRR006520Root Summer glycyrrhizin high producing strain16.666
DRR006521Root Winter glycyrrhizin high producing strain17.926
DRR006522Root Winter glycyrrhizin high producing strain17.407
DRR006523Root Summer glycyrrhizin low producing strain14.776
DRR006524Root Summer glycyrrhizin low producing strain14.649
DRR006525Leaf Summer glycyrrhizin high producing strain13.148
DRR006526Leaf Summer glycyrrhizin high producing strain12.840

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.023
SRR2868004Drought Stress(Tissue:root)26.001
SRR2967015Control (Tissue:root)24.845

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.690
SRR9715740Leave20.050
SRR9715741Leave19.082
SRR9715739Root4.847
SRR9715742Root11.982
SRR9715743Root10.206

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.343
SRR8749028MeJA induced 9h36.285
SRR8749029MeJA induced 9h35.070
SRR8749030Uninduced16.596
SRR8749031Uninduced12.651
SRR8749032Uninduced19.099

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.677
SRR8400027Control-Root20.053

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved