Gene detail information of Glyur001414s00037880.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00050.1 | 2.00E-82 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_004514235.1 | 0 | PREDICTED: transcription factor UNE10-like [Cicer arietinum] |
| Swissprot | tr|Q8GZ38|UNE10_ARATH | 1.00E-105 | Transcription factor UNE10 |
| trEMBL | tr|I1J6F8|I1J6F8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G15930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01414 | 53794 | 61228 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001414s00037880.1 | PF00010.21 | HLH | 308 | 353 | 4.00E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.204 |
| SRR1783600 | control | 0.227 |
| SRR1783602 | moderate drought stress | 0.080 |
| SRR1811619 | moderate drought stress | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.398 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.348 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 84.355 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 82.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.179 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.663 |
| SRR2967015 | Control (Tissue:root) | 0.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 144.225 |
| SRR9715740 | Leave | 208.177 |
| SRR9715741 | Leave | 149.581 |
| SRR9715739 | Root | 0.091 |
| SRR9715742 | Root | 3.166 |
| SRR9715743 | Root | 2.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.035 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.171 |
| SRR8400027 | Control-Root | 0.933 |