Gene detail information of Glyur001415s00034559.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21410.18.00E-146cysteine-rich RLK (RECEPTOR-like protein kinase) 29
NRXP_003615455.10Cysteine-rich receptor-like protein kinase [Medicago truncatula]
COGYP_001958461.12.00E-18hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q8S9L6|CRK29_ARATH0Cysteine-rich receptor-like protein kinase 29 (Precursor)
trEMBLtr|G7KDB1|G7KDB1_MEDTR0Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:AES98413.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01415653713992+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001415s00034559.1PF01657.12Stress-antifung611572.00E-22
Glyur001415s00034559.1PF01657.12Stress-antifung1752724.60E-21
Glyur001415s00034559.1PF07714.12Pkinase_Tyr3726221.00E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.198
SRR1783600control0.168
SRR1783602moderate drought stress0.083
SRR1811619moderate drought stress0.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.104
DRR006520Root Summer glycyrrhizin high producing strain0.104
DRR006521Root Winter glycyrrhizin high producing strain0.008
DRR006522Root Winter glycyrrhizin high producing strain0.052
DRR006523Root Summer glycyrrhizin low producing strain0.053
DRR006524Root Summer glycyrrhizin low producing strain0.160
DRR006525Leaf Summer glycyrrhizin high producing strain0.341
DRR006526Leaf Summer glycyrrhizin high producing strain0.404

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.749
SRR2868004Drought Stress(Tissue:root)1.686
SRR2967015Control (Tissue:root)0.696

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.489
SRR9715740Leave1.972
SRR9715741Leave8.490
SRR9715739Root0.122
SRR9715742Root1.679
SRR9715743Root1.114

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.189
SRR8749028MeJA induced 9h0.448
SRR8749029MeJA induced 9h0.761
SRR8749030Uninduced1.972
SRR8749031Uninduced2.798
SRR8749032Uninduced0.979

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.552
SRR8400027Control-Root0.764

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved