Gene detail information of Glyur001416s00028540.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36000.12.00E-80Mitochondrial transcription termination factor family protein
NRXP_004488795.10PREDICTED: uncharacterized protein LOC101488912 [Cicer arietinum]
trEMBLtr|G8A0B6|G8A0B6_MEDTR0Putative uncharacterized protein {ECO:0000313|EMBL:AES84904.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014161951122342-


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001416s00028540.1PF02536.9mTERF581494.30E-06
Glyur001416s00028540.1PF02536.9mTERF1483023.70E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.222
SRR1783600control3.251
SRR1783602moderate drought stress2.585
SRR1811619moderate drought stress2.652

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.411
DRR006520Root Summer glycyrrhizin high producing strain2.728
DRR006521Root Winter glycyrrhizin high producing strain0.189
DRR006522Root Winter glycyrrhizin high producing strain0.184
DRR006523Root Summer glycyrrhizin low producing strain1.871
DRR006524Root Summer glycyrrhizin low producing strain1.523
DRR006525Leaf Summer glycyrrhizin high producing strain15.181
DRR006526Leaf Summer glycyrrhizin high producing strain15.136

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.892
SRR2868004Drought Stress(Tissue:root)3.226
SRR2967015Control (Tissue:root)2.563

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.239
SRR9715740Leave10.034
SRR9715741Leave6.635
SRR9715739Root2.371
SRR9715742Root1.671
SRR9715743Root1.922

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.843
SRR8749028MeJA induced 9h2.662
SRR8749029MeJA induced 9h2.219
SRR8749030Uninduced1.587
SRR8749031Uninduced0.000
SRR8749032Uninduced0.529

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.081
SRR8400027Control-Root1.830

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved