Gene detail information of Glyur001416s00028546.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79230.14.00E-142mercaptopyruvate sulfurtransferase 1
NRAFK34139.10unknown [Lotus japonicus]
COGYP_002297378.15.00E-993-mercaptopyruvate sulfurtransferase [Rhodospirillum centenum SW]
Swissprottr|O64530|STR1_ARATH0Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial (Precursor)
trEMBLtr|I3S1J7|I3S1J7_LOTJA0Sulfurtransferase {ECO:0000256|RuleBase:RU000507}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014165594662456+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01011TST, MPST, sseA EC:2.8.1.1 2.8.1.2 Sulfur metabolism map00920
Cysteine and methionine metabolismmap00270
Sulfur relay systemmap04122


Gene Ontology

molecular_function

GO:0004792  thiosulfate sulfurtransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001416s00028546.2PF00581.15Rhodanese1422601.50E-15
Glyur001416s00028546.2PF00581.15Rhodanese3043911.50E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control79.249
SRR1783600control79.242
SRR1783602moderate drought stress79.905
SRR1811619moderate drought stress79.392

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain102.671
DRR006520Root Summer glycyrrhizin high producing strain101.874
DRR006521Root Winter glycyrrhizin high producing strain49.674
DRR006522Root Winter glycyrrhizin high producing strain48.339
DRR006523Root Summer glycyrrhizin low producing strain106.684
DRR006524Root Summer glycyrrhizin low producing strain106.338
DRR006525Leaf Summer glycyrrhizin high producing strain71.762
DRR006526Leaf Summer glycyrrhizin high producing strain70.710

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)92.388
SRR2868004Drought Stress(Tissue:root)96.046
SRR2967015Control (Tissue:root)85.939

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave74.037
SRR9715740Leave93.521
SRR9715741Leave88.014
SRR9715739Root52.852
SRR9715742Root69.284
SRR9715743Root67.101

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h83.077
SRR8749028MeJA induced 9h65.269
SRR8749029MeJA induced 9h72.734
SRR8749030Uninduced65.320
SRR8749031Uninduced35.690
SRR8749032Uninduced49.552

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root79.544
SRR8400027Control-Root77.413

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved