Gene detail information of Glyur001417s00045110.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G13710.13.00E-179cytochrome P450, family 78, subfamily A, polypeptide 5
NRXP_004490206.10PREDICTED: cytochrome P450 78A3-like [Cicer arietinum]
COGYP_007126612.12.00E-28Unspecific monooxygenase [Gloeocapsa sp. PCC 7428]
Swissprottr|Q9LMX7|C78A5_ARATH0Cytochrome P450 78A5
trEMBLtr|G7JZ14|G7JZ14_MEDTR0Cytochrome P450 family protein {ECO:0000313|EMBL:AES97093.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014175637558383-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP78A5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001417s00045110.1PF00067.17p450775016.30E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.885
SRR1783600control4.829
SRR1783602moderate drought stress15.279
SRR1811619moderate drought stress15.350

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain37.886
DRR006520Root Summer glycyrrhizin high producing strain36.806
DRR006521Root Winter glycyrrhizin high producing strain0.465
DRR006522Root Winter glycyrrhizin high producing strain0.453
DRR006523Root Summer glycyrrhizin low producing strain48.906
DRR006524Root Summer glycyrrhizin low producing strain49.329
DRR006525Leaf Summer glycyrrhizin high producing strain19.433
DRR006526Leaf Summer glycyrrhizin high producing strain19.322

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.757
SRR2868004Drought Stress(Tissue:root)4.382
SRR2967015Control (Tissue:root)5.630

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.158
SRR9715740Leave29.419
SRR9715741Leave12.640
SRR9715739Root30.777
SRR9715742Root23.612
SRR9715743Root24.993

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.243
SRR8749028MeJA induced 9h6.870
SRR8749029MeJA induced 9h8.724
SRR8749030Uninduced6.961
SRR8749031Uninduced5.720
SRR8749032Uninduced5.620

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.032
SRR8400027Control-Root5.655

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved