Gene detail information of Glyur001418s00033592.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78530.14.00E-136Protein kinase superfamily protein
NRKEH38485.10receptor-like kinase [Medicago truncatula]
COGYP_001958461.12.00E-23hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9SYM9|Y1853_ARATH4.00E-170Receptor-like serine/threonine-protein kinase At1g78530
trEMBLtr|A0A072VK19|A0A072VK19_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:KEH38485.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014181340317925-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001418s00033592.1PF00069.20Pkinase272934.20E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.921
SRR1783600control10.128
SRR1783602moderate drought stress11.533
SRR1811619moderate drought stress11.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.908
DRR006520Root Summer glycyrrhizin high producing strain7.897
DRR006521Root Winter glycyrrhizin high producing strain0.202
DRR006522Root Winter glycyrrhizin high producing strain0.198
DRR006523Root Summer glycyrrhizin low producing strain12.709
DRR006524Root Summer glycyrrhizin low producing strain11.922
DRR006525Leaf Summer glycyrrhizin high producing strain1.311
DRR006526Leaf Summer glycyrrhizin high producing strain1.440

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.543
SRR2868004Drought Stress(Tissue:root)4.311
SRR2967015Control (Tissue:root)3.380

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.795
SRR9715740Leave1.865
SRR9715741Leave1.135
SRR9715739Root0.390
SRR9715742Root2.765
SRR9715743Root2.800

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.777
SRR8749028MeJA induced 9h2.525
SRR8749029MeJA induced 9h1.216
SRR8749030Uninduced2.169
SRR8749031Uninduced0.249
SRR8749032Uninduced0.155

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.688
SRR8400027Control-Root19.730