Gene detail information of Glyur001418s00033592.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G78530.1 | 4.00E-136 | Protein kinase superfamily protein |
NR | KEH38485.1 | 0 | receptor-like kinase [Medicago truncatula] |
COG | YP_001958461.1 | 2.00E-23 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
Swissprot | tr|Q9SYM9|Y1853_ARATH | 4.00E-170 | Receptor-like serine/threonine-protein kinase At1g78530 |
trEMBL | tr|A0A072VK19|A0A072VK19_MEDTR | 0 | Receptor-like kinase {ECO:0000313|EMBL:KEH38485.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold01418 | 13403 | 17925 | - |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:1.12.2 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur001418s00033592.1 | PF00069.20 | Pkinase | 27 | 293 | 4.20E-49 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 9.921 |
SRR1783600 | control | 10.128 |
SRR1783602 | moderate drought stress | 11.533 |
SRR1811619 | moderate drought stress | 11.500 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 7.908 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 7.897 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.202 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.198 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 12.709 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 11.922 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.311 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.440 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 2.543 |
SRR2868004 | Drought Stress(Tissue:root) | 4.311 |
SRR2967015 | Control (Tissue:root) | 3.380 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 1.795 |
SRR9715740 | Leave | 1.865 |
SRR9715741 | Leave | 1.135 |
SRR9715739 | Root | 0.390 |
SRR9715742 | Root | 2.765 |
SRR9715743 | Root | 2.800 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 1.777 |
SRR8749028 | MeJA induced 9h | 2.525 |
SRR8749029 | MeJA induced 9h | 1.216 |
SRR8749030 | Uninduced | 2.169 |
SRR8749031 | Uninduced | 0.249 |
SRR8749032 | Uninduced | 0.155 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 13.688 |
SRR8400027 | Control-Root | 19.730 |