Gene detail information of Glyur001425s00026819.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44480.21.00E-57beta glucosidase 17
NRKEH33228.11.15E-130glycoside hydrolase family 1 protein [Medicago truncatula]
COGYP_004449345.12.00E-38beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|A3RF67|BAGBG_DALNI1.00E-80Isoflavonoid 7-O-beta-apiosyl-glucoside beta-glycosidase {ECO:0000303|PubMed:16098548} (Precursor)
trEMBLtr|A0A072UVY4|A0A072UVY4_MEDTR4.00E-131Glycoside hydrolase family 1 protein {ECO:0000313|EMBL:KEH33228.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01425771211175-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001425s00026819.2PF00232.13Glyco_hydro_1811343.10E-19
Glyur001425s00026819.2PF00232.13Glyco_hydro_11373478.10E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.731
SRR1783600control0.734
SRR1783602moderate drought stress0.466
SRR1811619moderate drought stress0.432

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.020
DRR006520Root Summer glycyrrhizin high producing strain1.730
DRR006521Root Winter glycyrrhizin high producing strain0.225
DRR006522Root Winter glycyrrhizin high producing strain0.174
DRR006523Root Summer glycyrrhizin low producing strain12.869
DRR006524Root Summer glycyrrhizin low producing strain11.765
DRR006525Leaf Summer glycyrrhizin high producing strain2.463
DRR006526Leaf Summer glycyrrhizin high producing strain2.884

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)48.494
SRR2868004Drought Stress(Tissue:root)272.286
SRR2967015Control (Tissue:root)165.848

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave251.946
SRR9715740Leave49.478
SRR9715741Leave384.082
SRR9715739Root3.348
SRR9715742Root52.240
SRR9715743Root43.289

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.777
SRR8749028MeJA induced 9h33.918
SRR8749029MeJA induced 9h6.993
SRR8749030Uninduced826.587
SRR8749031Uninduced652.892
SRR8749032Uninduced146.797

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.571
SRR8400027Control-Root67.744

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved