Gene detail information of Glyur001425s00026821.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44450.19.00E-67beta glucosidase 15
NRKEH30288.11.79E-158cyanogenic beta-glucosidase, putative [Medicago truncatula]
COGYP_004449345.16.00E-54beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|Q7XKV2|BGL13_ORYSJ1.00E-107Beta-glucosidase 13 (Precursor)
trEMBLtr|A0A072UMJ5|A0A072UMJ5_MEDTR7.00E-159Cyanogenic beta-glucosidase, putative {ECO:0000313|EMBL:KEH30288.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014251839622873+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01188E3.2.1.21 EC:3.2.1.21 Starch and sucrose metabolism map00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001425s00026821.1PF00232.13Glyco_hydro_152514.60E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.787
SRR1783600control6.732
SRR1783602moderate drought stress5.392
SRR1811619moderate drought stress5.509

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.737
DRR006520Root Summer glycyrrhizin high producing strain9.667
DRR006521Root Winter glycyrrhizin high producing strain2.355
DRR006522Root Winter glycyrrhizin high producing strain2.290
DRR006523Root Summer glycyrrhizin low producing strain9.343
DRR006524Root Summer glycyrrhizin low producing strain9.891
DRR006525Leaf Summer glycyrrhizin high producing strain17.257
DRR006526Leaf Summer glycyrrhizin high producing strain16.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.453
SRR2868004Drought Stress(Tissue:root)11.900
SRR2967015Control (Tissue:root)10.513

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.222
SRR9715740Leave14.284
SRR9715741Leave7.052
SRR9715739Root0.879
SRR9715742Root5.557
SRR9715743Root4.301

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.926
SRR8749028MeJA induced 9h16.948
SRR8749029MeJA induced 9h11.908
SRR8749030Uninduced12.454
SRR8749031Uninduced5.597
SRR8749032Uninduced7.944

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.623
SRR8400027Control-Root12.611

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved