Gene detail information of Glyur001429s00035080.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G09010.12.00E-50Protein kinase superfamily protein
NRXP_002528112.17.80E-117conserved hypothetical protein [Ricinus communis]
COGYP_001958461.12.00E-08hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9ASQ6|Y1972_ARATH8.00E-31Probable LRR receptor-like serine/threonine-protein kinase At1g29720 (Precursor)
trEMBLtr|B9SQ43|B9SQ43_RICCO3.00E-117Putative uncharacterized protein {ECO:0000313|EMBL:EEF34291.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014291072714300-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001429s00035080.1PF07714.12Pkinase_Tyr25938.50E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.709
SRR1783600control0.681
SRR1783602moderate drought stress0.533
SRR1811619moderate drought stress0.386

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.681
DRR006520Root Summer glycyrrhizin high producing strain0.547
DRR006521Root Winter glycyrrhizin high producing strain1.464
DRR006522Root Winter glycyrrhizin high producing strain1.036
DRR006523Root Summer glycyrrhizin low producing strain2.195
DRR006524Root Summer glycyrrhizin low producing strain2.334
DRR006525Leaf Summer glycyrrhizin high producing strain2.691
DRR006526Leaf Summer glycyrrhizin high producing strain3.080

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.732
SRR2868004Drought Stress(Tissue:root)4.205
SRR2967015Control (Tissue:root)5.247

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.732
SRR9715740Leave8.757
SRR9715741Leave10.074
SRR9715739Root0.399
SRR9715742Root1.519
SRR9715743Root0.973

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.080
SRR8749031Uninduced0.031
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.113
SRR8400027Control-Root5.553

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved