Gene detail information of Glyur001435s00032609.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14000.10VH1-interacting kinase
NRXP_003517809.10PREDICTED: dual specificity protein kinase splA-like isoform X1 [Glycine max]
COGYP_003266171.15.00E-28serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-46Serine/threonine-protein kinase HT1
trEMBLtr|I1J5U2|I1J5U2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G06290.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014355526163312+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001435s00032609.1PF12796.2Ank_2311135.50E-13
Glyur001435s00032609.1PF00069.20Pkinase1514053.80E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.997
SRR1783600control2.084
SRR1783602moderate drought stress2.079
SRR1811619moderate drought stress1.938

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.589
DRR006520Root Summer glycyrrhizin high producing strain3.570
DRR006521Root Winter glycyrrhizin high producing strain5.217
DRR006522Root Winter glycyrrhizin high producing strain5.381
DRR006523Root Summer glycyrrhizin low producing strain3.432
DRR006524Root Summer glycyrrhizin low producing strain3.371
DRR006525Leaf Summer glycyrrhizin high producing strain3.722
DRR006526Leaf Summer glycyrrhizin high producing strain3.695

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.309
SRR2868004Drought Stress(Tissue:root)7.012
SRR2967015Control (Tissue:root)7.744

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.542
SRR9715740Leave13.077
SRR9715741Leave13.143
SRR9715739Root3.663
SRR9715742Root3.454
SRR9715743Root3.452

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.334
SRR8749028MeJA induced 9h12.508
SRR8749029MeJA induced 9h7.154
SRR8749030Uninduced7.805
SRR8749031Uninduced7.144
SRR8749032Uninduced4.768

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.804
SRR8400027Control-Root7.051

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved