Gene detail information of Glyur001436s00037948.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31940.15.00E-65cytochrome P450, family 82, subfamily C, polypeptide 4
NRXP_007222623.19.31E-94hypothetical protein PRUPE_ppa004179mg [Prunus persica]
COGYP_007100541.13.00E-29cytochrome P450 [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|O49858|C82A3_SOYBN7.00E-94Cytochrome P450 82A3
trEMBLtr|M5XCH7|M5XCH7_PRUPE3.00E-94Uncharacterized protein {ECO:0000313|EMBL:EMJ23822.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014362416825064+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001436s00037948.1PF00067.17p45021947.80E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.390
SRR1783600control25.450
SRR1783602moderate drought stress61.334
SRR1811619moderate drought stress61.735

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.368
DRR006520Root Summer glycyrrhizin high producing strain10.482
DRR006521Root Winter glycyrrhizin high producing strain35.086
DRR006522Root Winter glycyrrhizin high producing strain34.444
DRR006523Root Summer glycyrrhizin low producing strain41.163
DRR006524Root Summer glycyrrhizin low producing strain41.563
DRR006525Leaf Summer glycyrrhizin high producing strain178.280
DRR006526Leaf Summer glycyrrhizin high producing strain177.305

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.770
SRR2868004Drought Stress(Tissue:root)0.850
SRR2967015Control (Tissue:root)2.185

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave67.375
SRR9715740Leave74.545
SRR9715741Leave65.276
SRR9715739Root7.647
SRR9715742Root25.018
SRR9715743Root21.440

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.174
SRR8749028MeJA induced 9h29.589
SRR8749029MeJA induced 9h16.564
SRR8749030Uninduced8.888
SRR8749031Uninduced17.462
SRR8749032Uninduced23.462

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.721
SRR8400027Control-Root1.324

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved