Gene detail information of Glyur001437s00030303.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G17530.30Protein kinase superfamily protein
NRAET03584.20Serine/Threonine kinase family protein [Medicago truncatula]
COGYP_004584373.18.00E-12serine/threonine protein kinase with PASTA sensor(s) [Frankia symbiont of Datisca glomerata]
Swissprottr|P51568|AFC3_ARATH2.00E-41Serine/threonine-protein kinase AFC3
trEMBLtr|G7L8Q0|G7L8Q0_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AET03584.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014371711821277-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001437s00030303.1PF00069.20Pkinase404169.90E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.474
SRR1783600control13.500
SRR1783602moderate drought stress16.776
SRR1811619moderate drought stress16.593

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.353
DRR006520Root Summer glycyrrhizin high producing strain23.400
DRR006521Root Winter glycyrrhizin high producing strain23.978
DRR006522Root Winter glycyrrhizin high producing strain23.216
DRR006523Root Summer glycyrrhizin low producing strain28.755
DRR006524Root Summer glycyrrhizin low producing strain29.737
DRR006525Leaf Summer glycyrrhizin high producing strain9.511
DRR006526Leaf Summer glycyrrhizin high producing strain9.666

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.764
SRR2868004Drought Stress(Tissue:root)35.676
SRR2967015Control (Tissue:root)39.971

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.596
SRR9715740Leave28.562
SRR9715741Leave28.651
SRR9715739Root10.325
SRR9715742Root26.393
SRR9715743Root24.327

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.383
SRR8749028MeJA induced 9h12.530
SRR8749029MeJA induced 9h8.722
SRR8749030Uninduced10.942
SRR8749031Uninduced8.323
SRR8749032Uninduced4.882

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.457
SRR8400027Control-Root42.522

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved