Gene detail information of Glyur001446s00035033.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40620.11.00E-72Basic-leucine zipper (bZIP) transcription factor family protein
NRXP_007142045.10hypothetical protein PHAVU_008G247800g [Phaseolus vulgaris]
Swissprottr|Q6S4P4|RF2B_ORYSJ2.00E-106Transcription factor RF2b
trEMBLtr|V7B884|V7B884_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW14039.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014467273463-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP
EAR motif-containing ProteinsbZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001446s00035033.1PF00170.16bZIP_11782305.00E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.200
SRR1783600control18.352
SRR1783602moderate drought stress11.777
SRR1811619moderate drought stress11.050

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.950
DRR006520Root Summer glycyrrhizin high producing strain14.625
DRR006521Root Winter glycyrrhizin high producing strain1.692
DRR006522Root Winter glycyrrhizin high producing strain1.989
DRR006523Root Summer glycyrrhizin low producing strain15.396
DRR006524Root Summer glycyrrhizin low producing strain14.432
DRR006525Leaf Summer glycyrrhizin high producing strain10.304
DRR006526Leaf Summer glycyrrhizin high producing strain9.978

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.577
SRR2868004Drought Stress(Tissue:root)32.077
SRR2967015Control (Tissue:root)31.468

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.318
SRR9715740Leave11.547
SRR9715741Leave15.203
SRR9715739Root14.864
SRR9715742Root15.253
SRR9715743Root12.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.243
SRR8749028MeJA induced 9h31.920
SRR8749029MeJA induced 9h20.431
SRR8749030Uninduced9.118
SRR8749031Uninduced6.925
SRR8749032Uninduced6.641

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.297
SRR8400027Control-Root33.440

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved