Gene detail information of Glyur001446s00035035.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32010.1 | 2.00E-139 | HSI2-like 1 |
| NR | XP_004490716.1 | 0 | PREDICTED: B3 domain-containing protein Os07g0679700-like [Cicer arietinum] |
| Swissprot | tr|Q8W4L5|VAL1_ARATH | 0 | B3 domain-containing transcription repressor VAL1 |
| trEMBL | tr|K7LR55|K7LR55_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G31234.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01446 | 14914 | 24737 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
| EAR motif-containing Proteins | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001446s00035035.1 | PF02362.16 | B3 | 324 | 424 | 1.30E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.973 |
| SRR1783600 | control | 10.138 |
| SRR1783602 | moderate drought stress | 11.078 |
| SRR1811619 | moderate drought stress | 11.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.800 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.674 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.738 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.812 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.979 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.909 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.418 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.626 |
| SRR2967015 | Control (Tissue:root) | 11.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.992 |
| SRR9715740 | Leave | 9.972 |
| SRR9715741 | Leave | 11.587 |
| SRR9715739 | Root | 2.424 |
| SRR9715742 | Root | 10.548 |
| SRR9715743 | Root | 7.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.024 |
| SRR8749028 | MeJA induced 9h | 17.513 |
| SRR8749029 | MeJA induced 9h | 15.358 |
| SRR8749030 | Uninduced | 11.136 |
| SRR8749031 | Uninduced | 7.245 |
| SRR8749032 | Uninduced | 6.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.905 |
| SRR8400027 | Control-Root | 11.500 |