Gene detail information of Glyur001446s00035038.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30490.11.00E-77cinnamate-4-hydroxylase
NRQ96423.17.94E-143RecName: Full=Trans-cinnamate 4-monooxygenase; AltName: Full=Cinnamic acid 4-hydroxylase; Short=C4H; Short=CA4H; AltName: Full=Cytochrome P450 73; AltName: Full=Cytochrome P450C4H [Glycyrrhiza echinata]
COGYP_003513810.11.00E-23cytochrome P450 [Stackebrandtia nassauensis DSM 44728]
Swissprottr|Q96423|TCMO_GLYEC4.00E-145Trans-cinnamate 4-monooxygenase
trEMBLtr|E3NYG3|E3NYG3_9FABA3.00E-140Cinnamic acid 4-hydroxylase {ECO:0000313|EMBL:ABQ53544.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014464933449993-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP73A5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00487CYP73A EC:1.14.13.11 Degradation of aromatic compounds map01220
Phenylalanine metabolismmap00360
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001446s00035038.1PF00067.17p450152096.50E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control568.794
SRR1783600control623.633
SRR1783602moderate drought stress520.651
SRR1811619moderate drought stress521.549

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain157.270
DRR006520Root Summer glycyrrhizin high producing strain165.993
DRR006521Root Winter glycyrrhizin high producing strain62.924
DRR006522Root Winter glycyrrhizin high producing strain60.907
DRR006523Root Summer glycyrrhizin low producing strain307.891
DRR006524Root Summer glycyrrhizin low producing strain308.935
DRR006525Leaf Summer glycyrrhizin high producing strain258.097
DRR006526Leaf Summer glycyrrhizin high producing strain255.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1204.397
SRR2868004Drought Stress(Tissue:root)1586.224
SRR2967015Control (Tissue:root)1587.859

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave627.371
SRR9715740Leave547.359
SRR9715741Leave512.222
SRR9715739Root974.445
SRR9715742Root702.706
SRR9715743Root800.725

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h254.967
SRR8749028MeJA induced 9h288.476
SRR8749029MeJA induced 9h145.398
SRR8749030Uninduced1450.151
SRR8749031Uninduced788.538
SRR8749032Uninduced403.145

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root935.329
SRR8400027Control-Root802.816

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved