Gene detail information of Glyur001446s00035040.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30490.14.00E-70cinnamate-4-hydroxylase
NRQ96423.13.71E-96RecName: Full=Trans-cinnamate 4-monooxygenase; AltName: Full=Cinnamic acid 4-hydroxylase; Short=C4H; Short=CA4H; AltName: Full=Cytochrome P450 73; AltName: Full=Cytochrome P450C4H [Glycyrrhiza echinata]
Swissprottr|Q96423|TCMO_GLYEC2.00E-98Trans-cinnamate 4-monooxygenase
trEMBLtr|Q2ENF8|Q2ENF8_ASTMO6.00E-96Trans-cinnamate 4-monooxygenase {ECO:0000313|EMBL:ABD17288.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014467019570635-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP98A3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00487CYP73A EC:1.14.13.11 Degradation of aromatic compounds map01220
Phenylalanine metabolismmap00360
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001446s00035040.1PF00067.17p45021425.90E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control138.680
SRR1783600control133.585
SRR1783602moderate drought stress114.161
SRR1811619moderate drought stress109.308

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain108.284
DRR006520Root Summer glycyrrhizin high producing strain107.707
DRR006521Root Winter glycyrrhizin high producing strain41.058
DRR006522Root Winter glycyrrhizin high producing strain40.312
DRR006523Root Summer glycyrrhizin low producing strain110.835
DRR006524Root Summer glycyrrhizin low producing strain131.528
DRR006525Leaf Summer glycyrrhizin high producing strain118.556
DRR006526Leaf Summer glycyrrhizin high producing strain121.166

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)568.860
SRR2868004Drought Stress(Tissue:root)844.797
SRR2967015Control (Tissue:root)803.125

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave376.224
SRR9715740Leave316.710
SRR9715741Leave316.790
SRR9715739Root842.221
SRR9715742Root711.587
SRR9715743Root718.561

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h102.389
SRR8749028MeJA induced 9h208.695
SRR8749029MeJA induced 9h61.368
SRR8749030Uninduced498.348
SRR8749031Uninduced200.833
SRR8749032Uninduced103.121

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root760.962
SRR8400027Control-Root643.231

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved