Gene detail information of Glyur001446s00035041.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30490.14.00E-21cinnamate-4-hydroxylase
NRQ96423.11.05E-45RecName: Full=Trans-cinnamate 4-monooxygenase; AltName: Full=Cinnamic acid 4-hydroxylase; Short=C4H; Short=CA4H; AltName: Full=Cytochrome P450 73; AltName: Full=Cytochrome P450C4H [Glycyrrhiza echinata]
Swissprottr|Q96423|TCMO_GLYEC5.00E-48Trans-cinnamate 4-monooxygenase
trEMBLtr|J9QUP9|J9QUP9_POPTR1.00E-43Cinnamate 4-hydroxylase {ECO:0000313|EMBL:AFR37656.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold014467113971513+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP83A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00487CYP73A EC:1.14.13.11 Degradation of aromatic compounds map01220
Phenylalanine metabolismmap00360
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001446s00035041.1PF00067.17p45034803.70E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1543.911
SRR1783600control1556.089
SRR1783602moderate drought stress943.638
SRR1811619moderate drought stress943.142

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain193.856
DRR006520Root Summer glycyrrhizin high producing strain195.189
DRR006521Root Winter glycyrrhizin high producing strain73.984
DRR006522Root Winter glycyrrhizin high producing strain71.543
DRR006523Root Summer glycyrrhizin low producing strain268.159
DRR006524Root Summer glycyrrhizin low producing strain271.872
DRR006525Leaf Summer glycyrrhizin high producing strain320.095
DRR006526Leaf Summer glycyrrhizin high producing strain319.452

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)787.067
SRR2868004Drought Stress(Tissue:root)1140.060
SRR2967015Control (Tissue:root)1106.150

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave372.892
SRR9715740Leave315.206
SRR9715741Leave312.984
SRR9715739Root729.914
SRR9715742Root729.116
SRR9715743Root675.198

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h89.058
SRR8749028MeJA induced 9h307.876
SRR8749029MeJA induced 9h51.793
SRR8749030Uninduced364.752
SRR8749031Uninduced121.380
SRR8749032Uninduced82.590

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1272.730
SRR8400027Control-Root1250.811

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved