Gene detail information of Glyur001451s00036280.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09730.2 | 6.00E-128 | Cysteine proteinases superfamily protein |
| NR | KHN08258.1 | 0 | Putative ubiquitin-like-specific protease 2B [Glycine soja] |
| Swissprot | tr|Q8L7S0|ULP2B_ARATH | 2.00E-159 | Probable ubiquitin-like-specific protease 2B |
| trEMBL | tr|K7KJ35|K7KJ35_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09965.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01451 | 18901 | 30129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | ULP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001451s00036280.1 | PF02902.14 | Peptidase_C48 | 369 | 576 | 3.30E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.021 |
| SRR1783600 | control | 23.027 |
| SRR1783602 | moderate drought stress | 27.619 |
| SRR1811619 | moderate drought stress | 27.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.157 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.611 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.697 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.213 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.926 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.497 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.088 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.124 |
| SRR2967015 | Control (Tissue:root) | 38.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 18.442 |
| SRR9715740 | Leave | 20.935 |
| SRR9715741 | Leave | 23.818 |
| SRR9715739 | Root | 3.161 |
| SRR9715742 | Root | 15.675 |
| SRR9715743 | Root | 12.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.948 |
| SRR8749028 | MeJA induced 9h | 34.291 |
| SRR8749029 | MeJA induced 9h | 30.632 |
| SRR8749030 | Uninduced | 49.487 |
| SRR8749031 | Uninduced | 69.618 |
| SRR8749032 | Uninduced | 51.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 30.487 |
| SRR8400027 | Control-Root | 29.508 |